Package | Description |
---|---|
biolockj.module.implicit.parser |
This package contains Parser BioModules in the r16s and WGS sub-packages that are paired with a
ClassifierModule via
BioModule.getPostRequisiteModules() to run immediately after the
classifier. |
biolockj.node |
Package
biolockj.node contains core classes instantiated by the
ParserModule to hold Sample ID-(OTU name/count) data read in from
ClassifierModule output. |
Modifier and Type | Method and Description |
---|---|
ParsedSample |
ParserModuleImpl.getParsedSample(String sampleId) |
ParsedSample |
ParserModule.getParsedSample(String sampleId)
After
ParserModule.parseSamples() completes, this method can be called to get a ParsedSample by
its sample ID. |
Modifier and Type | Method and Description |
---|---|
int |
ParsedSample.compareTo(ParsedSample o) |